The Clinical Microbiome Compendium

Flore Clinical · Microbiome Compendium

The Clinical Microbiome Compendium

A clinician-facing reference library drawing together Flore Clinical's peer-informed writing on the gut microbiome — organized by topic to support evidence-based decision-making at the point of care.

About this resource. Flore (formerly Sun Genomics) has applied whole-genome stool sequencing to personalized probiotic manufacturing for nearly a decade. The clinical insights below are grounded in that longitudinal, real-world dataset — tens of thousands of formulations and follow-up samples across diverse patient populations.

For the underlying methodology and outcome data, see The Evidence and our Clinical Evidence overview. Providers can prescribe individualized formulations through the Flore Clinical portal.

Foundations

Microbiome Foundations

Core reference material for clinicians integrating microbiome science into practice — from a structural primer on the human gut ecosystem to the mechanics of dysbiosis and the metabolites that mediate host effects.

The Flore approach

Precision Microbiome Medicine

How Flore translates whole-genome stool sequencing and nearly a decade of longitudinal outcome data into individualized formulations — and what that body of evidence now lets us tell clinicians.

Therapeutics

Probiotics, Prebiotics & Postbiotics in Practice

Evidence-based application of biotic interventions at the point of care, including dietary strategy and the emerging role of postbiotic metabolites.

Systemic axes

The Gut & Systemic Health

The microbiome's reach extends well beyond the gut. These reviews trace the immune, neurological, hepatic, oral, and metabolic axes that connect gut microbial ecology to systemic disease.

Life stage & populations

Life Stage & Special Populations

Microbiome considerations across critical developmental windows and physiological transitions, from pediatric neurodevelopment to menopause.

Prescribe gut healthcare with confidence.

Flore Clinical pairs whole-genome microbiome sequencing with individualized, made-to-order formulations — built from your patient's data, not a fixed catalog. Bring precision microbiome medicine into your practice.